Scientists believe bacteria in our gut can influence weight gain or loss

Efficiency of bacteria that break down what we eat may affect efforts to trim our waistlines

PUBLISHED : Sunday, 15 December, 2013, 5:08am
UPDATED : Monday, 13 June, 2016, 12:45pm

In 2008, Rob Knight fell ill while holidaying in Peru. Camping along the Inca Trail, he found himself with the usual traveller's symptoms, scrambling for the latrine in the middle of the night.

He took antibiotics for five days and got better, but then relapsed. A second five-day course of the drugs finally knocked out the infection.

After he returned home to America, Knight resumed his normal diet and exercise, and suddenly began dropping pounds that he had been trying to shed for years. He is convinced the antibiotics changed the composition of the microbes in his gut in a way that finally caused him to lose weight, about 30kg.

"Exercise and diet, which had not worked before, began to work," says Knight, a professor of chemistry and biochemistry at the University of Colorado at Boulder who studies the microorganisms that live in our bodies, known as the human microbiome. "I think that reconfiguring my gut microbial community made it possible."

His experience underscores a growing body of evidence suggesting that naturally occurring bacteria and other microbes in the body, and possibly even viruses, can influence weight in ways that scientists are only just beginning to understand. Numerous studies are under way looking at the role of intestinal organisms in obesity, with a focus on how they extract energy from food and how this affects weight gain or loss.

Ultimately, scientists say, insights gained from the research could identify people predisposed to obesity and possibly help clinicians create targeted weight-loss treatments for them. The specific composition of microbes in the intestines might also help predict the best candidates for weight-loss surgery, which doesn't work for everyone.

"Taken together, we might at some point be able to effect weight loss in humans by affecting the microbiome," Knight says.

Despite the popularity of fad diets, most experts believe there is no quick fix to losing weight. They view regulation of body weight as a complicated process that is likely to involve diet and exercise, genetics and, probably, various gastrointestinal microbes.

Studies in mice have shown that intestinal microbes may contribute to weight gain. A novel experiment published recently, for example, took gut bacteria from human twins, in which one was lean and the other obese, and transferred them into lean mice. The animals with bacteria from fat twins grew fat; those that received bacteria from lean twins stayed lean.

Researchers suspect that bacteria may behave similarly among humans, since microbes help to extract calories from food and store that potential energy in fat tissue.

They speculate that people are more likely to gain weight when gut bacteria are more efficient at breaking down food, enabling the body to absorb more calories. They theorise that less-efficient bacteria allow food to pass more quickly through the intestines.

The food one eats contributes to the composition of the bacterial communities in the gut. For example, Fraser says, "high-fat, low-fibre diets have been associated with different bacteria in the gut than low-fat, high-fibre diets", which may play a role in who develops obesity. "It may be a vicious cycle but one we can interrupt by altering our dietary habits."

Recent studies by Stanley Hazen of the Cleveland Clinic, for example, have found that gastrointestinal bacteria "burp" out a chemical called TMAO (for trimethylamine N-oxide) after people consume red meat or eggs. TMAO increases the risk of heart attack and stroke, which may help explain why eating those foods increases the danger of heart disease more than following a vegan or vegetarian diet.


In another study, Fraser, Knight and colleagues studied members of the Old Order Amish in Lancaster, in the US state of Pennsylvania, to see what their gut microbes might reveal about obesity in that community.

The Amish were ideal study subjects, being a genetically homogeneous society with a shared lifestyle, including a diet that features "lots of meat, potatoes and gravy, very high fat and high carbohydrate", Fraser says.

The researchers analysed data from 310 people and identified 26 species of gut bacteria that were found at different concentrations in obese individuals who had or didn't have metabolic syndrome. Metabolic syndrome is a cluster of conditions that includes hypertension, high blood-sugar levels, abnormal cholesterol, excess body fat around the waist and elevated serum markers associated with inflammation. The syndrome has been found to increase the risk of heart disease, stroke and diabetes.

One of the hallmarks of metabolic syndrome is chronic low-grade inflammation in the body, and "some of the bacterial species that were found at greatly reduced levels in subjects with the metabolic syndrome have been shown to have anti-inflammatory properties", Fraser says.

Knight points out, however, that the difference in microbial communities might be the result of inflammation rather than the cause of it, a question additional studies will need to examine.

Scientists also are trying to understand the influence of gut microbes in the outcome of weight-loss surgery, with the goal of identifying the best candidates for the procedure. In 2010, about 150,000 individuals underwent weight-loss surgery in the United States.

Bruce Rittmann, director of the Swette Centre for Environmental Biotechnology in the Biodesign Institute at Arizona State University, was part of a group of researchers who looked at microbes in gastric bypass surgery patients for a 2009 study.

He and team leader Rosa Krajmalnik-Brown, associate professor in the Swette Centre, analysed stool samples from nine people in three groups: three individuals of normal weight, three who were morbidly obese and three who had undergone gastric bypass.

"The results were very striking," Rittmann says. "Even though we didn't have a large number of subjects, the groups were completely different from each other."

The composition of microbes in the three gastric bypass patients differed substantially and in potentially important ways from obese and normal-weight individuals, suggesting the extreme anatomical changes resulting from the surgery apparently had profound effects on the micro-organisms in the intestine.


There were two types of organisms specific to the obese group. The microbial populations extracted from obese individuals were high in hydrogen-producing bacteria and hydrogen-consuming methanogens, which are not bacteria.

The results suggest a co-operative co-existence in obese individuals between hydrogen producers and hydrogen consumers that contributes to obesity.

"Managing the microbial community in our intestines is one of the tools of helping us manage obesity and other diseases," Rittman says. "It's conceivable that someday we could get rid of the wrong micro-organisms and put the right ones in."